Fuel Injection Death

Fuel Injection Death

mary Zeman via Melissa Bryan posted about an accident where a student nurse in training (3rd day on the job) administered a feeding bag of coffee and milk instead of a unit of blood. http://goo.gl/otI4e  For starters, I don’t think coffee mixed with milk looks like a unit of blood. Nevertheless, in Mary’s post I explained what I think likely happened, e.g., COD.

Nutritional specialist Dr. Armando Carreir told the network that Ribeiro’s death “would have been as if [she] was suffocating.” from HuffPuff: http://goo.gl/euhoM

So how can the patient be suffocating? It was likely due to pulmonary edema (fluid in the lungs). So how did the patient get fluid in the lungs? Not knowing the exact mixture of coffee and milk, I’m guessing that the mixture was hypertonic. Let me back up and talk briefly about intravenous (IV) pharmaceuticals.

When you adminster a large volume of fluids IV, it has to be at physiologic pH (7.4), isotonic, and iso-oncotic. There are cases where you can give a fluid that is not one of these three properties to correct for the patients condition.

Tonicity

From the Wiki:

Tonicity is a measure of the osmotic pressure gradient (as defined by the water potential of the two solutions) of two solutions separated by a semipermeable membrane. It is commonly used when describing the response of cells immersed in an external solution. Like osmotic pressure, tonicity is influenced only by solutes that cannot cross the membrane, as only these exert an osmotic pressure. Solutes able to freely cross the membrane do not affect tonicity because they will always be in equal concentrations on both sides of the membrane.

There are three classifications of tonicity that one solution can have relative to another. The three are hypertonic, hypotonic, and isotonic. There’s a good figure in the Wiki that shows what happens to the blood cells in the three types of tonicity. 

http://en.wikipedia.org/wiki/Isotonicity#Isotonicity

Colloid osmotic pressure (COP) or Oncotic pressure

COP  is an osmotic pressure caused by protiens in the vasculature which opposes the hydrostatic pressure. The normal COP of plasma is between 20-25 tor.  An increase in COP above normal levels will lead to water leaving the interstitium and entering the vascular space.  http://en.wikipedia.org/wiki/Oncotic_pressure

Here’s a great guide on IV fluids for nurses: http://goo.gl/bilmc

Image Source: http://goo.gl/jrwtK

#ScienceEveryday when it isn’t #ScienceSunday

Illuminating Science

Illuminating Science

Thanks Richard Smith for this timely reminder about science and science communication. In addition to the events you mentioned, the recent legal action in Italy involving scientist and the earthquake also warrants some edification.

Part of the mission of  ScienceSunday is to reach out to the general population on G+ and explain what is real science. Of course we have fun with jokes, puns, and memes. However, we want people to have a place where they can ask questions and learn about real science. We want a place where we can explain why something might be pseudoscience. Finally, we want to share our passion for science and hope to encourage others to join our passion for science.

Here are a few of my posts that are related to either correcting pseudoscience or bad science related journalism.

Bad science → bad headlines

http://goo.gl/epcnr 

Overselling preclinical results – Orac

http://goo.gl/oe4mg

Analysis of Meta-analysis

http://goo.gl/xaG99  

Alarming science discovery…

http://goo.gl/sLjT5

the idea of the contradiction comes from what I see as the deepest misunderstanding about science, which is the idea that science is about certainty.

http://goo.gl/0e7p7

If you are interested in science, circle ScienceSunday  and watch for   #ScienceEveryday  when it isn’t   #ScienceSunday

#Anti_anti_intellectualism

Originally shared by Richard Smith-Unna

Science as a candle in the dark; our responsibility as scientists

Today for ScienceSunday I want to take a moment to talk about something serious.

Anti-science and irrationality have a strong hold in the modern world. Political, religious and cultural values often conflict with what science tells us, and lead to situations which are not just intellectually frustrating, but in the worst cases lead to people’s lives being put at risk.

As an example, the NHS in the UK currently funds four homeopathic hospitals (http://goo.gl/8qSzX, to learn why homeopathy is a problem: http://1023.org.uk).  It’s not just sad, it tears at the fabric of my intellectual being to see my country treating people with such distain.

At the same time, we see the scientific method being abused to oppose GM agriculture; a group of technologies which have the potential to avert future food crises and eventually provide food security for the whole world (http://goo.gl/Q0J4o).

And even within the scientific community, we have recently seen that chauvinism and discrimination are serious problems (http://goo.gl/OdHFW).

In each case, we as members of the science-supporting public or the scientific community can do something to address the problem. More than that – it’s our responsibility to do so.

We can make our voices heard, invest our time and effort in expelling mysticism and ignorance. When we see abuses, we can expose them. We can collectively discuss and hone our methods of communication and argumentation. We can join forces to have a greater impact, and to support each other when the incessant battle gets demoralising. I don’t have the solution, but we do.

The problem is that it’s difficult and demoralising to talk to someone who is anti-science. How do you deal with irrationality? How do you debate with someone whose world view rejects evidence for dogma? Please discuss.

This was inspired by Buddhini Samarasinghe’s post: http://goo.gl/o9bC5. ScienceSunday is curated by Rajini Rao, Chad Haney, Robby Bowles, and Allison Sekuler.

#sciencesunday   #scienceeveryday

http://www.youtube.com/watch?v=Q3OZz-vgAjY

Buzz about when natural remedies become real medicine

Buzz about when natural remedies become real medicine

Buddhini Samarasinghe ,others, and I often mention how alternative medicine becomes medicine when it’s rigorously tested. Here’s an example from the The University of Chicago . Chih-Pin Chuu et al, in Dr. Richard Jones’ lab report how Caffeic Acid Phenethyl Ester (CAFE) suppress cell proliferation of prostate cancer cells. CAPE is the active ingredient in beehive propolis (see below). They started with cancer cells in vitro and then moved to a mouse model.

From the University of Chicago news blurb (http://goo.gl/vtJ22): 

But if CAPE were to truly make the crossover from holistic remedy to clinical option, the scientists would also have to demonstrate how the compound freezes cancer cells in a non-proliferative state. Enter the micro-western array, the innovative proteomics technique first described in 2010 by Jones and colleagues. 

Once they found their target pathway from the micro-western array, they over-express components of those pathways to block the effect of CAPE. This kind of follows my diet post earlier today (http://goo.gl/vlUWT). CAPE makes the cancer cells think there is no nutrients available. There is mention of patent issues in the article, i.e., it would be hard to get a drug company to pay for the clinical trials on this because propolis cannot be patented. For more on that issue, check out my Bench to Bedside post. http://goo.gl/xpu7W

Caffeic acid phenethyl ester suppresses the proliferation of human prostate cancer cells through inhibition of p70S6K and Akt signaling networks.

Chuu CP, Lin HP, Ciaccio MF, Kokontis JM, Hause RJ Jr, Hiipakka RA, Liao S, Jones RB.

Cancer Prev Res (Phila). 2012 May;5(5):788-97.  http://goo.gl/iwFGW

In searching for a good eye catching photo to go along with the article, I realized that the image in the news blurb is a stock image from Wikipedia. It was also used in this interesting article.

Image of propolis, the sticky resin that bees line their hive with. In a PLosONE article Michael Simone-Finstrom and Marla Spivak report it’s anti-fungal properties.  http://goo.gl/duvSC

#ScienceEveryday  when it isn’t #ScienceSunday  

Dwarf species of fanged dinosaur emerges from southern Africa

Dwarf species of fanged dinosaur emerges from southern Africa

The link below is from The University of Chicago it’s slightly different than the other news blurbs you’ve probably seen already. Also the full article is Open Access. Be warned the PDF is 125 MB. There is a 25 MB version.

Paul C. Sereno, “Taxonomy, Morphology, Masticatory Function and Phylogeny of Heterodontosaurid Dinosaurs,” ZooKeys online, Oct. 3, 2012.

http://goo.gl/jqBcG

More from National Geographic  http://goo.gl/lBWDK

I’ve done some imaging for Paul. Leave a comment if you would like Dr. Paul Sereno at The University of Chicago to discuss Pegomastax africanus on a #SSHOw  I will try to tempt Paul into a HO if there is enough interest.

#ScienceEveryday  when it isn’t #ScienceSunday

http://news.uchicago.edu/article/2012/10/03/dwarf-species-fanged-dinosaur-emerges-southern-africa

Check out the #SSHOw  – Eye of Horus

Check out the #SSHOw  – Eye of Horus

Round 3 of the #SSHOw  (ScienceSunday HO-woot) will be about the upcoming “Birds of Egypt” exhibit at the Oriental Institute, focusing on how medical imaging helped.

#ScienceEveryday  when it isn’t #ScienceSunday  

Originally shared by ScienceSunday

Join us this Sunday where JP Brown from the The Field Museum Christian Wietholt from VSG, Rozenn Bailleul-LeSuer from the Oriental Institute (OI), and Chad Haney from the University of Chicago (ScienceSunday co-curator) preview the upcoming Birds of Egypt exhibit. They will be discussing their contributions to the project, mainly focusing on how computed tomography (CT) was helpful in examining the artifacts, non-destructively.

Here’s the original Eye of Horus (Mummy bird) post:  http://goo.gl/sbzJq Here’s the link to the actual exhibit at the OI: http://goo.gl/EU2oS

Here’s the TimeAndDate announcement planner so you don’t miss the #SSHOw  : http://goo.gl/J6gGl

events/cfievqo4q70601lfdbufnd573bk

Overselling preclinical results – Orac

Overselling preclinical results – Orac

Here’s an article by an anti-quack blogger extraordinaire. http://goo.gl/DRpQk    It says a lot of what I said in my comments about the Telegraph article discussed here and the linked discussion within:

Bench to Bedside

http://goo.gl/63mKa

Of course Orac does a much better job of taking the article apart.

Attached image:

A scanning electrom microscopic image of HIV. The glycoprotein complex on its surface enables the virus to attach to and fuse with target cells to initiate the infectious cycle.

http://goo.gl/VaU8M

#ScienceEveryday  when it isn’t #ScienceSunday  

Bench to Bedside

Bench to Bedside

A little background on translational research or medicine, often also called “bench to bedside”. In a post by Max Huijgen (http://goo.gl/VNT3Z) there was a lively discussion about an article in the Telegraph about a seemingly miracle cancer drug sitting in a freezer in Sweden. The article stated that because the scientist had published the work, no pharmaceutical company would touch it, to bring it to market. The idea was, no patent means no profit. A large part of the discussion was about crowdfunding for this frozen drug.

There were three things that Rajini Rao some others, and I tried to explain, about the article and the conversation. First, the cost of getting a drug “from bench to bedside” was grossly underestimated by people suggesting crowdfunding. Here’s the reference Rajini provided regarding the cost of clinical trials (http://goo.gl/YXD55). It can be $28k per patient, just to get started, i.e., Phase I. Which leads to the second issue; lack of understanding what is drug development or discovery. How do you get a compound from idea, to bench work, and finally to market. The last issue is the treatment in the story itself.

The figures below are from an excellent overview of the process of drug development. The example is for cancer research but it is applicable to essentially all drug discovery.  So when you hear scientist like me, talk about Phase III clinical trials or INDs, you’ll know what they mean. http://goo.gl/ZF88v

There is also a good, albeit a bit old, review on translation research.

Review: Translational science: past, present, and future by S. H. Curry

BioTechniques 44, 2008   http://goo.gl/B5DV6

In that review, they mention acetaminophen being published and therefore the university couldn’t capitalize on the discovery. If the premise of the Telegraph article were true then acetaminophen should not be in every medicine cabinet today. Clearly the inability to directly patent a compound does not preclude getting it to market. I say directly because acetaminophen was patented at some point.

History of acetaminophen or paracetamol

http://en.wikipedia.org/wiki/Paracetamol#History 

Getting back to the Telegraph article and the miracle drug. The Swedish group’s current paper, that has in vivo data (the rest are in vitro) has a 40% survival rate at 100 days, using six mice per group. I also find it curious that the virus is supposed to be targeted but they did not inject it systemically. It was injected directly into the tumor.

J Virol. 2011 Dec;85(24):13114-23.

http://www.ncbi.nlm.nih.gov/pubmed/21957304

Although it is interesting and promising work, I wouldn’t put any money towards it with such a small study. Typically, much more pre-clinical work is done before even thinking of putting a therapeutic agent into humans. As others stated in the thread, there are tons of therapies that cure mice but do not work in humans.

The adenovirus that I have worked on is not targeted per se. It has to be injected directly into the tumor. However, the gene is activated only where you irradiate. The tumor gets a double whamy: radiation and damage from the gene therapy. It was in a phase 1 trial, published here: Clin Cancer Res. 2004 Sep 1;10(17):5747-53.  http://www.ncbi.nlm.nih.gov/pubmed/15355902?

I want to emphasize that I have nothing against the research done by the Swedish group. I do have an issue with the Telegraph article. The author talks about his keen investigative skills to find the Swedish group but yet doesn’t do due diligence in finding out the true potential of this therapy. Again, it’s interesting work but a 40% survival rate in mice, in a small single study, is not a miracle drug. The author even mentions the Amgen “investigation” (but gives no reference) as a reason to be cautious. It’s actually a commentary, not a peer-reviewed publication. My commentary about it was posted a while ago, here: http://goo.gl/98HmX?  One should be cautious because a lot promising pre-clinical studies don’t pan out, not because of a commentary in reproducibility.  Reproducibility is certainly important and is a problem in some areas of research. It’s frustrating that the post follows the same tone as the Telegraph article. However, as a proponent of science, I’m happy that there was a lively discussion and there was an opportunity to educate.

#ScienceEveryday  when it isn’t #ScienceSunday  

QualiaSoup: Evolution and Open-mindedness

QualiaSoup: Evolution and Open-mindedness

I saw this video via Matt Uebel and really helps when you feel like engaging with creationist. A lot of times I just don’t have the energy. Nice share Trev Warth 

I search my circled peoples and apparently a lot of you have seen another video by QualiaSoup on being open-minded.

Open-mindedness

It is equally well done.

#ScienceEveryday   #Anti_anti_intellectualism  

Originally shared by Trev W

Evolution Explained

This is probably my favourite video on evolution, due to it being informative and bite-size, touching on both natural and artificial selection. I felt the need to post this in response to some of the comments made in a post of mine earlier today, rather than responding to every comment:

https://plus.google.com/110614416163543421878/posts/4tjSxLdqXRT

If you would like to get a better idea of what evolution is then click the play button below.

http://www.youtube.com/watch?v=vss1VKN2rf8

Logic with False Premises and Cherry Picking

Logic with False Premises and Cherry Picking

This is so WIN. I ♥ this discussion.

Eugenie Scott, in an interview with Liza Gross, talks about cherry picking data by anti-science folks and using logic with a false premise (anomalies). She also discusses how there are dichotomies setup (false ones) that make it difficult to reach the people that might not be anti-science.

Regarding anti-vaxxers, Scott had this to say To understand this phenomenon you really have to dig deeper into what is motivating people. First of all, I’d like to distinguish between the people who lead these movements versus the people who follow them. They’re not the ones generating the vaccine anomaly, so to speak, but they’ve read this literature and they’re parroting what they’ve heard. And your heart goes out to them. They’re concerned about their children. They don’t want their kids to get sick. But as many admit, they don’t fully understand the science. And your decisions are obviously going to be influenced by your emotions. We’re human beings, not automatons. But you need to temper them with good information, empirical information, dare I say scientific information, in order to make the best decisions.

Since people liked it, I’m adding this quote from my profile page:

There is a cult of ignorance in the United States, and there always has been. The strain of anti-intellectualism has been a constant thread winding its way through our political and cultural life, nurtured by the false notion that democracy means that “my ignorance is just as good as your knowledge.”

     Isaac Asimov, column in Newsweek (21 January 1980)

     

#Anti_anti_intellectualism

Big h/t to Liza Gross 

#ScienceEveryday  when it isn’t #ScienceSunday

Originally shared by Liza Gross

How to deal with science denialists? Talk to America’s No. 1 science defender:   cc ScienceSunday 

Moore Nuclear Energy

Moore Nuclear Energy

Joanne Manaster posted this re-share from Jim Carver. The post was of a video from The Guardian about a video entitled How to build a nuclear power plant. The video is 13 min. long but it is informative. I would link directly to Jim’s post with a hat tip but it appears that he’s blocked me. Maybe he’s a Colorado Avalanche fan.  http://goo.gl/0yteQ

Anyway, the post reminded me that I had promised some of my G+ pals that I would post pictures of Henry Moore’s Nuclear Energy sculpture, which marks the location of the first self-sustaining nuclear chain reaction. It was accomplished on 2 December 1942 under the supervision of Enrico Fermi along with Leó Szilárd, discoverer of the chain reaction. You can read more in the Wiki: http://en.wikipedia.org/wiki/Chicago_Pile-1 

The site is next to the new Mansueto Library at the University of Chicago, which you can see in my profile scrapbook. The site is both a National Historic Landmark and a Chicago Landmark. You can read more about Henry Moore’s sculpture here: http://en.wikipedia.org/wiki/Nuclear_Energy_(sculpture) 

The site for the new nuclear plant, in the video, is in Finland. I couldn’t think of a Finnish singer so I came up with Lykke Li who is Swedish. Geographically that’s close enough. I know in hockey, there’s a big difference.

I leave you with Lykke Li- I know places 

Edit so as not to offend anyone from Finland, I found a Finnish band in my music collection.

Husky Rescue – My World

http://en.wikipedia.org/wiki/Husky_Rescue

Interested in LFTR, here are a couple of posts.

http://goo.gl/nf0md

http://goo.gl/9Sj5r

Tommy Leung mentioned today, on his #ScienceSunday  post, if science and art can go together. Of course they can. Science is beautiful. Science is everywhere just tag ScienceSunday curated by Allison Sekuler Rajini Rao Robby Bowles and me (with guest curator Buddhini Samarasinghe ) For the rest of the week tag #ScienceEveryday  and mention one of us. Circle ScienceSunday so that it is easier to mention you back and interact with you in general.